image module

Created on Fri Jan 11 14:04:59 2019

@author: felix

image.locate_centriole_files(infolder, key='.tif', exclude=None)

Locate the stack files of centriole images.

infolder: top-level folder of where the .tifs can be found key: the extension of the file

files: list of sorted filepaths.

image.read_multiimg_PIL(tiffile)

Use pillow library to read .tif/.TIF files. (single frame)

tiffile: input .tif file to read, can be multipage .tif (string) frame: desired frarme number given as C-style 0-indexing (int)

a numpy array that is either:

(n_frames x n_rows x n_cols) for grayscale or (n_frames x n_rows x n_cols x 3) for RGB